Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.76□□□□□ -0.05
Cacna1bO55017 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.76□□□□□ -0.05
Cacna1bO55017 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cacna1bO55017 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cacna1bO55017 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cacna1bO55017 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Gm14127-201ENSMUST00000117906 678 ntBASIC14.75□□□□□ -0.05
Cacna1bO55017 Gm13015-201ENSMUST00000118674 204 ntBASIC14.75□□□□□ -0.05
Cacna1bO55017 Gm25144-201ENSMUST00000179561 110 ntBASIC14.75□□□□□ -0.05
Cacna1bO55017 Gm25352-201ENSMUST00000179815 110 ntBASIC14.75□□□□□ -0.05
Cacna1bO55017 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.75□□□□□ -0.05
Cacna1bO55017 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cacna1bO55017 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cacna1bO55017 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.75□□□□□ -0.05
Cacna1bO55017 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
Cacna1bO55017 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.75□□□□□ -0.05
Cacna1bO55017 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.75□□□□□ -0.05
Cacna1bO55017 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.75□□□□□ -0.05
Cacna1bO55017 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.75□□□□□ -0.05
Cacna1bO55017 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Cacna1bO55017 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cacna1bO55017 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Gm15487-201ENSMUST00000122373 465 ntBASIC14.74□□□□□ -0.05
Cacna1bO55017 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.74□□□□□ -0.05
Cacna1bO55017 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cacna1bO55017 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Gm7488-201ENSMUST00000117148 684 ntBASIC14.74□□□□□ -0.05
Cacna1bO55017 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Cacna1bO55017 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cacna1bO55017 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cacna1bO55017 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cacna1bO55017 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.73□□□□□ -0.05
Cacna1bO55017 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cacna1bO55017 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cacna1bO55017 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Cacna1bO55017 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.73□□□□□ -0.05
Cacna1bO55017 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.73□□□□□ -0.05
Cacna1bO55017 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms