Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.32■□□□□ 0.2
Kcnu1O54982 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.32■□□□□ 0.2
Kcnu1O54982 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.32■□□□□ 0.2
Kcnu1O54982 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Kcnu1O54982 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.32■□□□□ 0.2
Kcnu1O54982 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Kcnu1O54982 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
Kcnu1O54982 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Kcnu1O54982 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.31■□□□□ 0.2
Kcnu1O54982 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.31■□□□□ 0.2
Kcnu1O54982 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.31■□□□□ 0.2
Kcnu1O54982 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Gm13418-201ENSMUST00000119097 944 ntBASIC16.31■□□□□ 0.2
Kcnu1O54982 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.31■□□□□ 0.2
Kcnu1O54982 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Kcnu1O54982 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Kcnu1O54982 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Kcnu1O54982 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.3■□□□□ 0.2
Kcnu1O54982 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.3■□□□□ 0.2
Kcnu1O54982 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Kcnu1O54982 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.3■□□□□ 0.2
Kcnu1O54982 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Kcnu1O54982 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.3■□□□□ 0.2
Kcnu1O54982 Gm4535-201ENSMUST00000182274 558 ntBASIC16.3■□□□□ 0.2
Kcnu1O54982 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Gm10355-201ENSMUST00000097146 517 ntBASIC16.3■□□□□ 0.2
Kcnu1O54982 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Kcnu1O54982 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.29■□□□□ 0.2
Kcnu1O54982 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.29■□□□□ 0.2
Kcnu1O54982 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Kcnu1O54982 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Kcnu1O54982 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.29■□□□□ 0.2
Kcnu1O54982 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Kcnu1O54982 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Kcnu1O54982 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Kcnu1O54982 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Kcnu1O54982 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Kcnu1O54982 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms