Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.41■□□□□ 0.06
Phox2bO35690 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.41■□□□□ 0.06
Phox2bO35690 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC15.41■□□□□ 0.06
Phox2bO35690 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Phox2bO35690 Gm17837-201ENSMUST00000186435 985 ntBASIC15.41■□□□□ 0.06
Phox2bO35690 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.41■□□□□ 0.06
Phox2bO35690 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.41■□□□□ 0.06
Phox2bO35690 Gm18363-201ENSMUST00000221671 730 ntBASIC15.41■□□□□ 0.06
Phox2bO35690 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Phox2bO35690 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.41■□□□□ 0.06
Phox2bO35690 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Phox2bO35690 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.41■□□□□ 0.06
Phox2bO35690 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Phox2bO35690 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Phox2bO35690 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.4■□□□□ 0.06
Phox2bO35690 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.4■□□□□ 0.06
Phox2bO35690 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.4■□□□□ 0.06
Phox2bO35690 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Phox2bO35690 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.4■□□□□ 0.06
Phox2bO35690 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Phox2bO35690 Gm44855-201ENSMUST00000205725 362 ntBASIC15.4■□□□□ 0.06
Phox2bO35690 Gm44719-201ENSMUST00000206404 149 ntBASIC15.4■□□□□ 0.06
Phox2bO35690 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.4■□□□□ 0.06
Phox2bO35690 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Phox2bO35690 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Phox2bO35690 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Phox2bO35690 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Phox2bO35690 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Phox2bO35690 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.39■□□□□ 0.05
Phox2bO35690 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.39■□□□□ 0.05
Phox2bO35690 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.39■□□□□ 0.05
Phox2bO35690 Gm43630-201ENSMUST00000201550 776 ntBASIC15.39■□□□□ 0.05
Phox2bO35690 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.39■□□□□ 0.05
Phox2bO35690 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.39■□□□□ 0.05
Phox2bO35690 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Phox2bO35690 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Phox2bO35690 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Phox2bO35690 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Phox2bO35690 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Phox2bO35690 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Phox2bO35690 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Phox2bO35690 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms