Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.11■□□□□ 0.01
Slc1a6O35544 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.11■□□□□ 0.01
Slc1a6O35544 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Slc1a6O35544 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc1a6O35544 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Slc1a6O35544 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.1■□□□□ 0.01
Slc1a6O35544 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Slc1a6O35544 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.1■□□□□ 0.01
Slc1a6O35544 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.1■□□□□ 0.01
Slc1a6O35544 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.1■□□□□ 0.01
Slc1a6O35544 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Slc1a6O35544 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc1a6O35544 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc1a6O35544 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc1a6O35544 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Gm6433-201ENSMUST00000118634 875 ntBASIC15.09■□□□□ 0.01
Slc1a6O35544 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc1a6O35544 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.09■□□□□ 0.01
Slc1a6O35544 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc1a6O35544 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.08■□□□□ 0.01
Slc1a6O35544 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.08■□□□□ 0
Slc1a6O35544 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Gm10013-201ENSMUST00000106074 672 ntBASIC15.08■□□□□ 0
Slc1a6O35544 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Slc1a6O35544 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc1a6O35544 Gm19164-201ENSMUST00000210667 640 ntBASIC15.08■□□□□ 0
Slc1a6O35544 Gm9172-201ENSMUST00000212092 954 ntBASIC15.08■□□□□ 0
Slc1a6O35544 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Slc1a6O35544 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Slc1a6O35544 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Slc1a6O35544 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Slc1a6O35544 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.08■□□□□ 0
Slc1a6O35544 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc1a6O35544 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc1a6O35544 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc1a6O35544 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc1a6O35544 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc1a6O35544 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms