Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Gm15165-201ENSMUST00000118140 502 ntBASIC18.24■□□□□ 0.51
Hdac1O09106 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Hdac1O09106 Gm27742-201ENSMUST00000184667 60 ntBASIC18.24■□□□□ 0.51
Hdac1O09106 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.24■□□□□ 0.51
Hdac1O09106 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hdac1O09106 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hdac1O09106 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Hdac1O09106 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hdac1O09106 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.23■□□□□ 0.51
Hdac1O09106 Gm4459-201ENSMUST00000118750 468 ntBASIC18.23■□□□□ 0.51
Hdac1O09106 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.23■□□□□ 0.51
Hdac1O09106 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.23■□□□□ 0.51
Hdac1O09106 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Hdac1O09106 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.23■□□□□ 0.51
Hdac1O09106 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hdac1O09106 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hdac1O09106 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Hdac1O09106 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hdac1O09106 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hdac1O09106 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.22■□□□□ 0.51
Hdac1O09106 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.22■□□□□ 0.51
Hdac1O09106 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.22■□□□□ 0.51
Hdac1O09106 Gm12497-201ENSMUST00000138778 237 ntBASIC18.22■□□□□ 0.51
Hdac1O09106 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.22■□□□□ 0.51
Hdac1O09106 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Hdac1O09106 Gm23634-201ENSMUST00000175071 91 ntBASIC18.22■□□□□ 0.51
Hdac1O09106 Gm8318-201ENSMUST00000182954 872 ntBASIC18.22■□□□□ 0.51
Hdac1O09106 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.22■□□□□ 0.51
Hdac1O09106 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.22■□□□□ 0.51
Hdac1O09106 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.22■□□□□ 0.51
Hdac1O09106 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.22■□□□□ 0.51
Hdac1O09106 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hdac1O09106 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.22■□□□□ 0.51
Hdac1O09106 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Hdac1O09106 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hdac1O09106 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Hdac1O09106 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hdac1O09106 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.21■□□□□ 0.51
Hdac1O09106 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Hdac1O09106 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.21■□□□□ 0.51
Hdac1O09106 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.21■□□□□ 0.51
Hdac1O09106 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hdac1O09106 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.21■□□□□ 0.51
Hdac1O09106 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Hdac1O09106 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hdac1O09106 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
Hdac1O09106 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Hdac1O09106 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Hdac1O09106 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hdac1O09106 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hdac1O09106 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms