Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Trove2O08848 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.76■□□□□ 0.11
Trove2O08848 Gm5587-201ENSMUST00000206270 674 ntBASIC15.76■□□□□ 0.11
Trove2O08848 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.76■□□□□ 0.11
Trove2O08848 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Trove2O08848 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.76■□□□□ 0.11
Trove2O08848 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trove2O08848 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trove2O08848 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.75■□□□□ 0.11
Trove2O08848 Gm10052-201ENSMUST00000168019 960 ntBASIC15.75■□□□□ 0.11
Trove2O08848 Gm6623-201ENSMUST00000173570 544 ntBASIC15.75■□□□□ 0.11
Trove2O08848 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trove2O08848 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Gm7729-201ENSMUST00000050143 801 ntBASIC15.75■□□□□ 0.11
Trove2O08848 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.75■□□□□ 0.11
Trove2O08848 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trove2O08848 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.75■□□□□ 0.11
Trove2O08848 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trove2O08848 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.74■□□□□ 0.11
Trove2O08848 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trove2O08848 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trove2O08848 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Trove2O08848 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.74■□□□□ 0.11
Trove2O08848 Gm25016-201ENSMUST00000158399 131 ntBASIC15.74■□□□□ 0.11
Trove2O08848 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trove2O08848 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trove2O08848 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trove2O08848 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trove2O08848 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.73■□□□□ 0.11
Trove2O08848 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.73■□□□□ 0.11
Trove2O08848 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trove2O08848 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.73■□□□□ 0.11
Trove2O08848 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.73■□□□□ 0.11
Trove2O08848 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trove2O08848 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trove2O08848 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms