Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.67□□□□□ -0.7
Gm10542F6XDR3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm10542F6XDR3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Mir6404-201ENSMUST00000183699 94 ntBASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm10542F6XDR3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Gm11355-201ENSMUST00000121120 306 ntBASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm10542F6XDR3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm10542F6XDR3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm10542F6XDR3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Gm10542F6XDR3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.71
Gm10542F6XDR3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm10542F6XDR3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm10542F6XDR3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm10542F6XDR3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm10542F6XDR3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm10542F6XDR3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.64□□□□□ -0.71
Gm10542F6XDR3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Gm10542F6XDR3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm10542F6XDR3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm10542F6XDR3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Gm10542F6XDR3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm10542F6XDR3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm10542F6XDR3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms