Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.97□□□□□ -0.33
Cpsf4lE9Q2N0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gm18733-201ENSMUST00000173950 856 ntBASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gm4899-201ENSMUST00000178708 719 ntBASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gm27628-201ENSMUST00000184911 107 ntBASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gm7787-201ENSMUST00000216858 688 ntBASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Cpsf4lE9Q2N0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cpsf4lE9Q2N0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cpsf4lE9Q2N0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cpsf4lE9Q2N0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms