Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 AC165157.4-201ENSMUST00000220587 139 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm2606-201ENSMUST00000100754 1002 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm12537-201ENSMUST00000119266 1002 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm12070-201ENSMUST00000119551 1002 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm12671-201ENSMUST00000119978 1002 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm13292-201ENSMUST00000120014 1000 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC8.44□□□□□ -1.06
Herc1E9PZP8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm10359-201ENSMUST00000180167 1002 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm12033-201ENSMUST00000180654 1002 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm5559-201ENSMUST00000180755 1002 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Mir7654-201ENSMUST00000185082 70 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm7293-201ENSMUST00000216682 1007 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC8.44□□□□□ -1.06
Herc1E9PZP8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC8.44□□□□□ -1.06
Herc1E9PZP8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc1E9PZP8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm17823-201ENSMUST00000217830 1006 ntBASIC8.43□□□□□ -1.06
Herc1E9PZP8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm29649-201ENSMUST00000185649 419 ntBASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm24990-201ENSMUST00000157406 323 ntBASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm2467-201ENSMUST00000182266 1010 ntBASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gm9540-201ENSMUST00000188230 478 ntBASIC8.43□□□□□ -1.06
Herc1E9PZP8 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc1E9PZP8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Haglr-201ENSMUST00000100000 2085 ntBASIC8.42□□□□□ -1.06
Herc1E9PZP8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc1E9PZP8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Herc1E9PZP8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms