Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Gm25745-201ENSMUST00000174945 133 ntBASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc22a28B2RT89 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc22a28B2RT89 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Gm4459-201ENSMUST00000118750 468 ntBASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Gm15372-201ENSMUST00000120729 834 ntBASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Slc22a28B2RT89 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Slc22a28B2RT89 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms