Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm12887B1AVM1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm12887B1AVM1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Gm26039-201ENSMUST00000158152 144 ntBASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Gm44430-201ENSMUST00000203376 995 ntBASIC12.4□□□□□ -0.42
Gm12887B1AVM1 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.4□□□□□ -0.42
Gm12887B1AVM1 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.4□□□□□ -0.42
Gm12887B1AVM1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Gm12887B1AVM1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Gm12887B1AVM1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Gm12887B1AVM1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Gm12887B1AVM1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm12887B1AVM1 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm12887B1AVM1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm12887B1AVM1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Gm12887B1AVM1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms