Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Gm2272-201ENSMUST00000194903 582 ntBASIC14.96□□□□□ -0.01
Chd3B1AR17 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd3B1AR17 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chd3B1AR17 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd3B1AR17 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chd3B1AR17 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Chd3B1AR17 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.96□□□□□ -0.02
Chd3B1AR17 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.96□□□□□ -0.02
Chd3B1AR17 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.96□□□□□ -0.02
Chd3B1AR17 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.96□□□□□ -0.02
Chd3B1AR17 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chd3B1AR17 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Chd3B1AR17 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chd3B1AR17 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.96□□□□□ -0.02
Chd3B1AR17 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Chd3B1AR17 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chd3B1AR17 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Gm16198-201ENSMUST00000118766 670 ntBASIC14.95□□□□□ -0.02
Chd3B1AR17 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chd3B1AR17 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.95□□□□□ -0.02
Chd3B1AR17 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Chd3B1AR17 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.95□□□□□ -0.02
Chd3B1AR17 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chd3B1AR17 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chd3B1AR17 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.95□□□□□ -0.02
Chd3B1AR17 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd3B1AR17 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Chd3B1AR17 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.94□□□□□ -0.02
Chd3B1AR17 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Chd3B1AR17 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd3B1AR17 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Chd3B1AR17 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.93□□□□□ -0.02
Chd3B1AR17 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd3B1AR17 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd3B1AR17 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd3B1AR17 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd3B1AR17 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Chd3B1AR17 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd3B1AR17 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd3B1AR17 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd3B1AR17 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.93□□□□□ -0.02
Chd3B1AR17 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.93□□□□□ -0.02
Chd3B1AR17 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Chd3B1AR17 Rprl2-201ENSMUST00000157150 290 ntBASIC14.93□□□□□ -0.02
Chd3B1AR17 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chd3B1AR17 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms