Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.33□□□□□ -0.44
Chd6A3KFM7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.33□□□□□ -0.44
Chd6A3KFM7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chd6A3KFM7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.32□□□□□ -0.44
Chd6A3KFM7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.32□□□□□ -0.44
Chd6A3KFM7 Gm3961-201ENSMUST00000204425 994 ntBASIC12.32□□□□□ -0.44
Chd6A3KFM7 Gm9797-201ENSMUST00000052902 613 ntBASIC12.32□□□□□ -0.44
Chd6A3KFM7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.32□□□□□ -0.44
Chd6A3KFM7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Gm37259-201ENSMUST00000193903 849 ntBASIC12.31□□□□□ -0.44
Chd6A3KFM7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Gm37986-201ENSMUST00000193285 383 ntBASIC12.31□□□□□ -0.44
Chd6A3KFM7 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.31□□□□□ -0.44
Chd6A3KFM7 Gm18054-201ENSMUST00000207539 555 ntBASIC12.31□□□□□ -0.44
Chd6A3KFM7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.31□□□□□ -0.44
Chd6A3KFM7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.31□□□□□ -0.44
Chd6A3KFM7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.31□□□□□ -0.44
Chd6A3KFM7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chd6A3KFM7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.31□□□□□ -0.44
Chd6A3KFM7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.3□□□□□ -0.44
Chd6A3KFM7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.3□□□□□ -0.44
Chd6A3KFM7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Gm14263-201ENSMUST00000117955 746 ntBASIC12.3□□□□□ -0.44
Chd6A3KFM7 Gm27920-201ENSMUST00000183953 96 ntBASIC12.3□□□□□ -0.44
Chd6A3KFM7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.3□□□□□ -0.44
Chd6A3KFM7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Chd6A3KFM7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms