Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Gm9816-201ENSMUST00000122292 1414 ntBASIC7.95□□□□□ -1.14
Ubr4A2AN08 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Gm12566-201ENSMUST00000121479 359 ntBASIC7.95□□□□□ -1.14
Ubr4A2AN08 Gm11675-201ENSMUST00000121873 832 ntBASIC7.95□□□□□ -1.14
Ubr4A2AN08 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Gm37835-201ENSMUST00000193305 361 ntBASIC7.95□□□□□ -1.14
Ubr4A2AN08 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ubr4A2AN08 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Gm8810-201ENSMUST00000172895 754 ntBASIC7.94□□□□□ -1.14
Ubr4A2AN08 Gm8285-201ENSMUST00000208293 759 ntBASIC7.94□□□□□ -1.14
Ubr4A2AN08 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC7.94□□□□□ -1.14
Ubr4A2AN08 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Gm2383-201ENSMUST00000181461 807 ntBASIC7.94□□□□□ -1.14
Ubr4A2AN08 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Gm14267-206ENSMUST00000226870 1209 ntBASIC7.94□□□□□ -1.14
Ubr4A2AN08 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ubr4A2AN08 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Gm25545-201ENSMUST00000122673 323 ntBASIC7.93□□□□□ -1.14
Ubr4A2AN08 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Ubr4A2AN08 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms