Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav12-1A0N8R1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav12-1A0N8R1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Gm23634-201ENSMUST00000175071 91 ntBASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav12-1A0N8R1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav12-1A0N8R1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav12-1A0N8R1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms