Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smim17A0A504 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.92□□□□□ -0.18
Smim17A0A504 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smim17A0A504 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.92□□□□□ -0.18
Smim17A0A504 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smim17A0A504 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.92□□□□□ -0.18
Smim17A0A504 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.92□□□□□ -0.18
Smim17A0A504 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.92□□□□□ -0.18
Smim17A0A504 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.92□□□□□ -0.18
Smim17A0A504 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smim17A0A504 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.92□□□□□ -0.18
Smim17A0A504 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.92□□□□□ -0.18
Smim17A0A504 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.92□□□□□ -0.18
Smim17A0A504 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Smim17A0A504 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.92□□□□□ -0.18
Smim17A0A504 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smim17A0A504 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim17A0A504 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
Smim17A0A504 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.91□□□□□ -0.18
Smim17A0A504 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smim17A0A504 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Smim17A0A504 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.91□□□□□ -0.18
Smim17A0A504 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Smim17A0A504 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.91□□□□□ -0.18
Smim17A0A504 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Gm18115-201ENSMUST00000221209 621 ntBASIC13.91□□□□□ -0.18
Smim17A0A504 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.91□□□□□ -0.18
Smim17A0A504 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim17A0A504 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim17A0A504 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim17A0A504 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.9□□□□□ -0.18
Smim17A0A504 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smim17A0A504 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim17A0A504 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim17A0A504 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim17A0A504 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smim17A0A504 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smim17A0A504 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms