Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm3854A0A1B0GSS6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm22065-201ENSMUST00000103753 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm22066-201ENSMUST00000103761 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm24932-201ENSMUST00000103763 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm24115-201ENSMUST00000103799 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm22190-201ENSMUST00000103827 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm22191-201ENSMUST00000103831 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm24721-201ENSMUST00000103849 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm28018-201ENSMUST00000103869 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm26399-201ENSMUST00000103937 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm25349-201ENSMUST00000177728 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm23616-201ENSMUST00000177797 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm25871-201ENSMUST00000177816 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm24752-201ENSMUST00000178240 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm24496-201ENSMUST00000178287 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm25649-201ENSMUST00000178476 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm25548-201ENSMUST00000178681 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm23147-201ENSMUST00000178841 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm26095-201ENSMUST00000179270 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm22171-201ENSMUST00000179283 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm23936-201ENSMUST00000179354 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm22619-201ENSMUST00000179516 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm25255-201ENSMUST00000179579 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm24755-201ENSMUST00000179691 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm26506-201ENSMUST00000179692 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm25086-201ENSMUST00000179931 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm23243-201ENSMUST00000180047 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm24659-201ENSMUST00000180212 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm24169-201ENSMUST00000180244 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm23689-201ENSMUST00000180354 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm27359-201ENSMUST00000184153 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm27785-201ENSMUST00000184268 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm27466-201ENSMUST00000184396 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm27703-201ENSMUST00000184836 110 ntBASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm3854A0A1B0GSS6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm3854A0A1B0GSS6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms