Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav9d-4A0A0G2JG37 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav9d-4A0A0G2JG37 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Trav9d-4A0A0G2JG37 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav9d-4A0A0G2JG37 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm10710-201ENSMUST00000047876 3971 ntBASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav9d-4A0A0G2JG37 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav9d-4A0A0G2JG37 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms