Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm7729-201ENSMUST00000050143 801 ntBASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Trbv3A0A0A6YYE2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm16061-201ENSMUST00000122167 857 ntBASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm7213-201ENSMUST00000215977 950 ntBASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trbv3A0A0A6YYE2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm21814-202ENSMUST00000203277 873 ntBASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv3A0A0A6YYE2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv3A0A0A6YYE2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms