Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav21-dv12A0A075B6C4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm25745-201ENSMUST00000174945 133 ntBASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm27867-201ENSMUST00000184778 125 ntBASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Vti1a-206ENSMUST00000225529 1244 ntBASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav21-dv12A0A075B6C4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Grk6-207ENSMUST00000225925 2769 ntBASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav21-dv12A0A075B6C4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav21-dv12A0A075B6C4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms