Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm18101-201ENSMUST00000215769 548 ntBASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 AC134329.2-201ENSMUST00000217897 428 ntBASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Mir770-201ENSMUST00000103252 94 ntBASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Mir6404-201ENSMUST00000183699 94 ntBASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms