Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-2A0A075B649 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav13-2A0A075B649 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Trav13-2A0A075B649 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-2A0A075B649 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-2A0A075B649 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Gm13436-201ENSMUST00000120418 567 ntBASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav13-2A0A075B649 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Gm10052-201ENSMUST00000168019 960 ntBASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Gm20472-201ENSMUST00000174403 1240 ntBASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Gm7729-201ENSMUST00000050143 801 ntBASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Gm38577-201ENSMUST00000221531 4545 ntBASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav13-2A0A075B649 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav13-2A0A075B649 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms