Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Gm10013-201ENSMUST00000106074 672 ntBASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Gm10252-201ENSMUST00000209541 832 ntBASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav7-6A0A075B640 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Mir770-201ENSMUST00000103252 94 ntBASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Gm18032-201ENSMUST00000222541 538 ntBASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav7-6A0A075B640 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Gm9013-201ENSMUST00000132939 882 ntBASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav7-6A0A075B640 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Trav7-6A0A075B640 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms