Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav16d-dv11A0A075B617 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm11336-201ENSMUST00000118168 334 ntBASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm20049-201ENSMUST00000219950 730 ntBASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm10602-201ENSMUST00000098239 609 ntBASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav16d-dv11A0A075B617 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav16d-dv11A0A075B617 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav16d-dv11A0A075B617 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.26□□□□□ -0.61
Trav16d-dv11A0A075B617 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms