Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Gm13158-201ENSMUST00000122007 736 ntBASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Gm18671-201ENSMUST00000214826 683 ntBASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav4n-4A0A075B615 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Gm12008-201ENSMUST00000117791 755 ntBASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Gm6257-201ENSMUST00000163864 910 ntBASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Gm44450-201ENSMUST00000199528 114 ntBASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav4n-4A0A075B615 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms