Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm12134-201ENSMUST00000122109 520 ntBASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm45058-201ENSMUST00000205810 766 ntBASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm9987-201ENSMUST00000069768 567 ntBASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cx3cr1Q9Z0D9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Camk2g-217ENSMUST00000226630 1937 ntBASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cr1Q9Z0D9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm13559-201ENSMUST00000120476 863 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm11355-201ENSMUST00000121120 306 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm18959-201ENSMUST00000208954 655 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm21559-201ENSMUST00000220638 855 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Gm8587-201ENSMUST00000076538 843 ntBASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cr1Q9Z0D9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms