Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.97□□□□□ -0.49
CcsQ9WU84 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
CcsQ9WU84 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.97□□□□□ -0.49
CcsQ9WU84 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
CcsQ9WU84 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CcsQ9WU84 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.97□□□□□ -0.49
CcsQ9WU84 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CcsQ9WU84 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.97□□□□□ -0.49
CcsQ9WU84 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.97□□□□□ -0.49
CcsQ9WU84 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.97□□□□□ -0.49
CcsQ9WU84 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.97□□□□□ -0.49
CcsQ9WU84 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.97□□□□□ -0.49
CcsQ9WU84 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.97□□□□□ -0.49
CcsQ9WU84 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.97□□□□□ -0.49
CcsQ9WU84 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CcsQ9WU84 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CcsQ9WU84 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
CcsQ9WU84 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.96□□□□□ -0.49
CcsQ9WU84 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.96□□□□□ -0.49
CcsQ9WU84 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
CcsQ9WU84 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CcsQ9WU84 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.96□□□□□ -0.49
CcsQ9WU84 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CcsQ9WU84 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CcsQ9WU84 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CcsQ9WU84 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.96□□□□□ -0.5
CcsQ9WU84 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CcsQ9WU84 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CcsQ9WU84 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CcsQ9WU84 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CcsQ9WU84 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CcsQ9WU84 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CcsQ9WU84 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
CcsQ9WU84 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
CcsQ9WU84 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.95□□□□□ -0.5
CcsQ9WU84 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CcsQ9WU84 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
CcsQ9WU84 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CcsQ9WU84 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.95□□□□□ -0.5
CcsQ9WU84 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
CcsQ9WU84 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CcsQ9WU84 Gm23634-201ENSMUST00000175071 91 ntBASIC11.95□□□□□ -0.5
CcsQ9WU84 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CcsQ9WU84 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
CcsQ9WU84 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.95□□□□□ -0.5
CcsQ9WU84 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.95□□□□□ -0.5
CcsQ9WU84 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.95□□□□□ -0.5
CcsQ9WU84 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
CcsQ9WU84 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CcsQ9WU84 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CcsQ9WU84 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms