Protein–RNA interactions for Protein: Q9QY31

Snai3, Zinc finger protein SNAI3, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai3Q9QY31 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Snai3Q9QY31 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Snai3Q9QY31 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.11□□□□□ -0.63
Snai3Q9QY31 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Gm22240-201ENSMUST00000175225 82 ntBASIC11.11□□□□□ -0.63
Snai3Q9QY31 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Gm45058-201ENSMUST00000205810 766 ntBASIC11.11□□□□□ -0.63
Snai3Q9QY31 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.11□□□□□ -0.63
Snai3Q9QY31 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Snai3Q9QY31 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Mir5130-201ENSMUST00000175160 84 ntBASIC11.1□□□□□ -0.63
Snai3Q9QY31 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.1□□□□□ -0.63
Snai3Q9QY31 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.1□□□□□ -0.63
Snai3Q9QY31 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Snai3Q9QY31 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.09□□□□□ -0.63
Snai3Q9QY31 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Snai3Q9QY31 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Snai3Q9QY31 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Snai3Q9QY31 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms