Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Crlf1Q9JM58 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Crlf1Q9JM58 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Crlf1Q9JM58 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Crlf1Q9JM58 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Crlf1Q9JM58 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Crlf1Q9JM58 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Crlf1Q9JM58 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Crlf1Q9JM58 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Crlf1Q9JM58 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Crlf1Q9JM58 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.27□□□□□ -0.44
Crlf1Q9JM58 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Crlf1Q9JM58 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Crlf1Q9JM58 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.27□□□□□ -0.45
Crlf1Q9JM58 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.27□□□□□ -0.45
Crlf1Q9JM58 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Crlf1Q9JM58 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.26□□□□□ -0.45
Crlf1Q9JM58 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Gm27680-201ENSMUST00000184192 160 ntBASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Gm44719-201ENSMUST00000206404 149 ntBASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Crlf1Q9JM58 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Gm23984-201ENSMUST00000157139 203 ntBASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Mir7085-201ENSMUST00000184353 66 ntBASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Gm29541-201ENSMUST00000191351 678 ntBASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Crlf1Q9JM58 Gm44344-201ENSMUST00000200287 129 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms