Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPAP3Q9H6T3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
RPAP3Q9H6T3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 KRT18P65-201ENST00000439811 1286 ntBASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 AC018712.1-201ENST00000455767 687 ntBASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 AC011467.2-201ENST00000598425 242 ntBASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 ANO7L1-203ENST00000602586 1720 ntBASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPAP3Q9H6T3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 RBM17P3-201ENST00000417687 1192 ntBASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 RNPS1P1-201ENST00000507437 918 ntBASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPAP3Q9H6T3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 AL049840.3-201ENST00000602669 611 ntBASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 AC243591.1-201ENST00000452967 1364 ntBASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.93■□□□□ 0.94
RPAP3Q9H6T3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 AC073648.2-201ENST00000510116 352 ntBASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPAP3Q9H6T3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms