Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Gm22697-201ENSMUST00000175194 63 ntBASIC14.15□□□□□ -0.14
Dap3Q9ER88 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Dap3Q9ER88 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Dap3Q9ER88 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.15□□□□□ -0.15
Dap3Q9ER88 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Gm11355-201ENSMUST00000121120 306 ntBASIC14.14□□□□□ -0.15
Dap3Q9ER88 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Gm37722-201ENSMUST00000193757 208 ntBASIC14.14□□□□□ -0.15
Dap3Q9ER88 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Dap3Q9ER88 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.13□□□□□ -0.15
Dap3Q9ER88 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.13□□□□□ -0.15
Dap3Q9ER88 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Dap3Q9ER88 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Mir6982-201ENSMUST00000184354 68 ntBASIC14.12□□□□□ -0.15
Dap3Q9ER88 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Dap3Q9ER88 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms