Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Snrnp48Q9D361 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Snrnp48Q9D361 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.33■□□□□ 0.04
Snrnp48Q9D361 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Gm37153-201ENSMUST00000193637 231 ntBASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Snrnp48Q9D361 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Gm13884-201ENSMUST00000118103 829 ntBASIC15.31■□□□□ 0.04
Snrnp48Q9D361 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Gm5864-201ENSMUST00000202263 970 ntBASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Gm18195-201ENSMUST00000207604 706 ntBASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Gm10060-201ENSMUST00000212002 111 ntBASIC15.31■□□□□ 0.04
Snrnp48Q9D361 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Snrnp48Q9D361 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Sybu-209ENSMUST00000228639 4113 ntBASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Gm6550-201ENSMUST00000187574 993 ntBASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.3■□□□□ 0.04
Snrnp48Q9D361 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp48Q9D361 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp48Q9D361 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp48Q9D361 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp48Q9D361 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp48Q9D361 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Snrnp48Q9D361 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms