Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ddx47Q9CWX9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ddx47Q9CWX9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx47Q9CWX9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Mir1668-201ENSMUST00000184114 107 ntBASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ddx47Q9CWX9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms