Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim11Q99PQ2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Gm15358-201ENSMUST00000119249 520 ntBASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim11Q99PQ2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim11Q99PQ2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Ank2-226ENSMUST00000189368 339 ntBASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim11Q99PQ2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim11Q99PQ2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms