Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm10499-201ENSMUST00000174094 934 ntBASIC15.47■□□□□ 0.07
Cdh23Q99PF4 Gm5035-201ENSMUST00000215581 927 ntBASIC15.47■□□□□ 0.07
Cdh23Q99PF4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdh23Q99PF4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.46■□□□□ 0.07
Cdh23Q99PF4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdh23Q99PF4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdh23Q99PF4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cdh23Q99PF4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cdh23Q99PF4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Cdh23Q99PF4 Gm8062-201ENSMUST00000139696 444 ntBASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.45■□□□□ 0.06
Cdh23Q99PF4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdh23Q99PF4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdh23Q99PF4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Gm24543-201ENSMUST00000103867 82 ntBASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Gm13392-201ENSMUST00000117708 150 ntBASIC15.43■□□□□ 0.06
Cdh23Q99PF4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Gm8318-201ENSMUST00000182954 872 ntBASIC15.43■□□□□ 0.06
Cdh23Q99PF4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdh23Q99PF4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdh23Q99PF4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms