Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Gm18018-201ENSMUST00000198273 408 ntBASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Gm9063-201ENSMUST00000223299 582 ntBASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col25a1Q99MQ5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Gm9385-201ENSMUST00000117563 472 ntBASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col25a1Q99MQ5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Gm3786-201ENSMUST00000202659 378 ntBASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col25a1Q99MQ5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Col25a1Q99MQ5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.83■□□□□ 0.13
Col25a1Q99MQ5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Col25a1Q99MQ5 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.83■□□□□ 0.13
Col25a1Q99MQ5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col25a1Q99MQ5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Gm15321-201ENSMUST00000121290 288 ntBASIC15.83■□□□□ 0.12
Col25a1Q99MQ5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms