Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Gm12644-201ENSMUST00000119935 606 ntBASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Gm9172-201ENSMUST00000212092 954 ntBASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp1b1Q99LU0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp1b1Q99LU0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Chmp1b1Q99LU0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Chmp1b1Q99LU0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp1b1Q99LU0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp1b1Q99LU0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Chmp1b1Q99LU0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp1b1Q99LU0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp1b1Q99LU0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp1b1Q99LU0 Gm7153-201ENSMUST00000117092 455 ntBASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Gm27741-201ENSMUST00000185060 237 ntBASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp1b1Q99LU0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm8825-201ENSMUST00000182565 998 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm4518-201ENSMUST00000182638 718 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm17971-201ENSMUST00000190239 806 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp1b1Q99LU0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.5□□□□□ -0.09
Chmp1b1Q99LU0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms