Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.16■□□□□ 0.02
Clcc1Q99LI2 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.16■□□□□ 0.02
Clcc1Q99LI2 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Clcc1Q99LI2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Gm13597-201ENSMUST00000121239 375 ntBASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Gm17271-201ENSMUST00000165535 355 ntBASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clcc1Q99LI2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Clcc1Q99LI2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.13■□□□□ 0.01
Clcc1Q99LI2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Gm44492-201ENSMUST00000197012 141 ntBASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clcc1Q99LI2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms