Protein–RNA interactions for Protein: Q99K95

Rtfdc1, Protein RTF2 homolog, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1Q99K95 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Gm44335-201ENSMUST00000196879 141 ntBASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Gm44297-201ENSMUST00000198304 141 ntBASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Gm44346-201ENSMUST00000198851 141 ntBASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rtfdc1Q99K95 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Gm10154-201ENSMUST00000084445 354 ntBASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rtfdc1Q99K95 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Gm2272-201ENSMUST00000194903 582 ntBASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rtfdc1Q99K95 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.59■□□□□ 0.25
Rtfdc1Q99K95 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Rtfdc1Q99K95 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtfdc1Q99K95 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Rtfdc1Q99K95 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Rtfdc1Q99K95 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rtfdc1Q99K95 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms