Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdha9Q91Y11 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdha9Q91Y11 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdha9Q91Y11 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 BC037039-201ENSMUST00000192003 2205 ntBASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdha9Q91Y11 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdha9Q91Y11 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha9Q91Y11 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha9Q91Y11 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha9Q91Y11 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha9Q91Y11 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pcdha9Q91Y11 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Pcdha9Q91Y11 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha9Q91Y11 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdha9Q91Y11 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdha9Q91Y11 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms