Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Gm6376-201ENSMUST00000209407 580 ntBASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb1Q91Y08 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Gm7153-201ENSMUST00000117092 455 ntBASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.94■□□□□ 0.14
Pcdhb1Q91Y08 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb1Q91Y08 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb1Q91Y08 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms