Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.18■□□□□ 0.02
Pcdhga9Q91XX9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Gm5264-201ENSMUST00000190584 848 ntBASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdhga9Q91XX9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Asic1-205ENSMUST00000228185 1818 ntBASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Gm11779-201ENSMUST00000118541 368 ntBASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhga9Q91XX9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhga9Q91XX9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms