Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhgb5Q91XX5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Gm11745-201ENSMUST00000121669 448 ntBASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Gm44335-201ENSMUST00000196879 141 ntBASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Gm44297-201ENSMUST00000198304 141 ntBASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Gm44346-201ENSMUST00000198851 141 ntBASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb5Q91XX5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Gm13616-201ENSMUST00000120600 222 ntBASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Gm7063-201ENSMUST00000186840 981 ntBASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.17■□□□□ 0.02
Pcdhgb5Q91XX5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Gm14057-201ENSMUST00000120631 482 ntBASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Mir6990-201ENSMUST00000183724 91 ntBASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.16■□□□□ 0.02
Pcdhgb5Q91XX5 Gm10154-201ENSMUST00000084445 354 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms