Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgc5Q91XW9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Gm13616-201ENSMUST00000120600 222 ntBASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Gm11025-201ENSMUST00000140773 466 ntBASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Gm44872-201ENSMUST00000207864 420 ntBASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhgc5Q91XW9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhgc5Q91XW9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.46■□□□□ 0.38
Pcdhgc5Q91XW9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Grk6-207ENSMUST00000225925 2769 ntBASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhgc5Q91XW9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhgc5Q91XW9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms