Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tram1Q91V04 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.23□□□□□ -0.29
Tram1Q91V04 Gm2274-201ENSMUST00000184539 609 ntBASIC13.23□□□□□ -0.29
Tram1Q91V04 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Tram1Q91V04 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tram1Q91V04 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tram1Q91V04 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Tram1Q91V04 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Gm7367-201ENSMUST00000057611 492 ntBASIC13.22□□□□□ -0.29
Tram1Q91V04 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Tram1Q91V04 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tram1Q91V04 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tram1Q91V04 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tram1Q91V04 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Tram1Q91V04 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Tram1Q91V04 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Tram1Q91V04 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.21□□□□□ -0.29
Tram1Q91V04 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Tram1Q91V04 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.21□□□□□ -0.29
Tram1Q91V04 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.21□□□□□ -0.29
Tram1Q91V04 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.21□□□□□ -0.29
Tram1Q91V04 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Efs-202ENSMUST00000227037 2540 ntBASIC13.21□□□□□ -0.29
Tram1Q91V04 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Tram1Q91V04 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Tram1Q91V04 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Tram1Q91V04 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Tram1Q91V04 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tram1Q91V04 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tram1Q91V04 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Tram1Q91V04 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Tram1Q91V04 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Tram1Q91V04 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms