Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab40cQ8VHQ4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab40cQ8VHQ4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Efs-202ENSMUST00000227037 2540 ntBASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Mir6982-201ENSMUST00000184354 68 ntBASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab40cQ8VHQ4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rab40cQ8VHQ4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms