Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smg8Q8VE18 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smg8Q8VE18 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smg8Q8VE18 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smg8Q8VE18 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smg8Q8VE18 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smg8Q8VE18 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smg8Q8VE18 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smg8Q8VE18 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.31■□□□□ 0.2
Smg8Q8VE18 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.31■□□□□ 0.2
Smg8Q8VE18 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.3■□□□□ 0.2
Smg8Q8VE18 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smg8Q8VE18 App-207ENSMUST00000227737 2827 ntBASIC16.3■□□□□ 0.2
Smg8Q8VE18 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.3■□□□□ 0.2
Smg8Q8VE18 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.3■□□□□ 0.2
Smg8Q8VE18 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smg8Q8VE18 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Gm44335-201ENSMUST00000196879 141 ntBASIC16.29■□□□□ 0.2
Smg8Q8VE18 Gm44297-201ENSMUST00000198304 141 ntBASIC16.29■□□□□ 0.2
Smg8Q8VE18 Gm44346-201ENSMUST00000198851 141 ntBASIC16.29■□□□□ 0.2
Smg8Q8VE18 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.29■□□□□ 0.2
Smg8Q8VE18 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg8Q8VE18 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smg8Q8VE18 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg8Q8VE18 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smg8Q8VE18 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg8Q8VE18 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smg8Q8VE18 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg8Q8VE18 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smg8Q8VE18 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smg8Q8VE18 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smg8Q8VE18 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms