Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx39aQ8VDW0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Gm14701-201ENSMUST00000117156 348 ntBASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ddx39aQ8VDW0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Gm12008-201ENSMUST00000117791 755 ntBASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Gm27494-201ENSMUST00000184735 189 ntBASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ddx39aQ8VDW0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ddx39aQ8VDW0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ddx39aQ8VDW0 Mir1895-201ENSMUST00000122615 79 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms