Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gm5779-201ENSMUST00000218467 910 ntBASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim52Q8CDV4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Celf4-206ENSMUST00000224553 1729 ntBASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Gm11543-201ENSMUST00000120758 370 ntBASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Gm43767-201ENSMUST00000198933 381 ntBASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim52Q8CDV4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim52Q8CDV4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Mir7023-201ENSMUST00000185093 64 ntBASIC18.85■□□□□ 0.61
Trim52Q8CDV4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Gm20949-201ENSMUST00000206478 952 ntBASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim52Q8CDV4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Gm7063-201ENSMUST00000186840 981 ntBASIC18.84■□□□□ 0.61
Trim52Q8CDV4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Trim52Q8CDV4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim52Q8CDV4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Gm27430-201ENSMUST00000184585 107 ntBASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Gm44333-201ENSMUST00000197168 107 ntBASIC18.83■□□□□ 0.6
Trim52Q8CDV4 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim52Q8CDV4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms