Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Gm15358-201ENSMUST00000119249 520 ntBASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm9949Q8C9F4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm9949Q8C9F4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Gm11452-201ENSMUST00000122376 690 ntBASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gm9949Q8C9F4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gm9949Q8C9F4 Gm25990-201ENSMUST00000102440 86 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms